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Twenty years ago, Nature published a review characterizing aquaculture as a possible solution, and a contributing factor, to the decline in fisheries stocks worldwide1. At the time, the commercial aquaculture sector was flourishing, whereas the production of capture fisheries remained stagnant. The farmed (live-weight) production of fish and shellfish had almost tripled from 10 million tonnes (Mt) in 1987 to 29 Mt in 1997, and roughly 300 species of animals, plants, and algae were being cultivated worldwide2. The paper placed greater emphasis on fed marine species than on freshwater and molluscan species and cautioned that the net positive contribution of aquaculture to world fish supplies could not be sustained unless the sector reduced its use of wild fish in feed as well as its environmental impacts.

This Review covers global trends in aquaculture over the past 20 years, citing a selection of the most relevant papers (additional reviewed articles are listed in the Supplementary Information). In 2017, aquaculture supplied more than 80 Mt of fish and shellfish and 32 Mt of seaweeds, encompassing around 425 farmed species2. Three main patterns of aquaculture development have characterized the sector as it matured: continued growth in the volume and value chains of freshwater aquaculture; advances in fish nutrition, genetics, and alternative types of feed that reduce the use of wild fish in aquafeed formulations; and expanded culture of extractive bivalves and seaweeds with the potential to provide a wide range of food, industrial, and ecosystem services.

These trends reveal increasingly tight connections between land and sea. Continuing a long history of inland production, the share of freshwater fish raised on compound feed, which is made largely from terrestrial and some marine ingredients, has increased over the past two decades3. Meanwhile, the inclusion of plant-based ingredients in aquafeed has increased, and the production of extractive species (molluscs and seaweed) that filter nutrients from terrestrial and marine food systems has grown. Aquaculture has thus become more integrated into the global food system, with rapid growth in production and major transformations in feed ingredients, production technologies, farm management, and value chains. Through aquaculture growth, consumers from low- to high-income nations have benefited from year-round availability and access to aquatic foods, which are rich in protein and micronutrients4,5,6,7. The sector produces far more than fish, shellfish, and algae for direct human consumption. It also generates products used in food processing, feed, fuels, cosmetics, nutraceuticals, pharmaceuticals, and a variety of other industrial products, and it contributes to a range of ecosystem services8.

Despite impressive gains, the aquaculture sector still faces serious challenges that, in some cases, undermine its ability to achieve sustainable outcomes. The sector has generally embraced a business and societal expectation of environmentally and socially sound practices. Globally traded finfish and crustacean systems are progressively improving their environmental performances, either independently or in response to government regulation, private and public sector standards, and market incentives. Many aquaculture systems, however, still lack the motivation to meet sustainability criteria because their targeted markets do not reward producers through improved prices or access. At the same time, molluscs, filter-feeding finfish, and seaweeds have sustainable characteristics, particularly because they do not rely on aquafeed, but instead remove nutrients from the water column. In summary, as the global industry continues to expand, its contribution to economic social and environmental performance varies across a wide diversity of aquaculture systems.

Global expansion

Global aquaculture production more than tripled in live-weight volume from 34 Mt in 1997 to 112 Mt in 2017 (Fig. 1). The main species groups that contributed to the top 75% of aquaculture production in 2017 included seaweeds, carps, bivalves, tilapia, and catfish. Although the production of marine and diadromous fish species and crustaceans has also grown rapidly during this period, it has been dwarfed by the live-weight volume of marine bivalves and seaweeds, and by the production of freshwater aquaculture. Freshwater fish account for 75% of global edible aquaculture volume, reflecting their favourable conversion from live to edible weight in comparison to molluscs and crustaceans, which have high shell weights9. Because the previous review focused on marine-sourced feed in the production of high trophic marine and diadromous species, the dominant role of freshwater systems was only lightly covered1. The role of freshwater systems has gained attention in part because advances in feed technology and breeding, particularly for salmon and shrimp, are addressing earlier concerns regarding the effects of aquaculture on wild-capture fisheries.

Fig. 1: Composition and growth of global live-weight aquaculture production.
figure 1

a, The species composition is shown for 1997 and 2017. Green, plants and algae; blue, freshwater fish; pink, shellfish; orange, diadromous fish. b, c, Growth is shown from 1997 to 2017 for the following production categories (b): total, freshwater fish, algae, molluscs and CDMM, which comprises crustaceans, diadromous fish, marine fish, and miscellaneous species and is expanded in c. Algae comprised more than 99% of the production weight of ‘algae and aquatic plants’ production in 2017. Data were obtained from the FAO2. National data are reported on the basis of the ASFIS List of Species (http://www.fao.org/fishery/collection/asfis/en). NEI, not elsewhere included for species identification in question.

Source data

Aquaculture is more diverse today, with 40% more fish, shellfish, aquatic plant, and algal species cultivated in a wide variety of marine, brackish, and freshwater systems globally10. Global production remains concentrated, however, with only 22 of all 425 species groups farmed in 2017 (5%) accounting for over 75% of global live-weight production2 (Extended Data Fig. 1). A small fraction of the ‘aquatic plant and algae’ category (~32 Mt) consisted of aquatic plants (1,639 tonnes) in 20172. Aquatic plants are listed by the Food and Agriculture Organization (FAO) under ‘aquatic plants NEI’ and are underreported given the informal nature of the harvests for household and local consumption.

Asia remains the largest aquaculture producer, accounting for 92% of the live-weight volume of animals and seaweeds in 20172. Aquaculture in Asia is also more diverse than other regions in terms of production systems and cultivated species11. Nine of the top-ten ranked countries for aquaculture species diversity are in Asia, with China leading by a wide margin. As an example, China cultivated 86 different species of aquatic organisms in a variety of production systems in 2017, whereas Norway cultivated 13 different species, mainly in marine cage systems10.

China has an oversized role in nearly all areas of aquaculture production. Since 2000, the country has maintained its role as the largest global producer, processor, and trader of fish, crustaceans, and molluscs, and has emerged as a leading consumer owing to the rapid growth in income and domestic seafood demand12,13,14. China alone supplied 58% and 59% of the global aquaculture volume and value, respectively, for all categories combined in 2017 (Extended Data Table 1).

The role of China notwithstanding, the aquaculture sector has become increasingly global, with growth rates in South America and Africa exceeding Asia during the past two decades (albeit from a much smaller production base), and with relatively rapid expansion in South and Southeast Asia compared to East Asia3,15,16. The largest aquaculture producers outside Asia—each accounting for 1–2% of the global production—include Norway and Chile, which mainly produce Atlantic salmon (Salmo salar), and Egypt, which produces Nile tilapia (Oreochromis niloticus)17. Aquaculture in the Western Hemisphere has largely developed around single- or dual-species and single-production systems (for example, Atlantic salmon in cages, Nile tilapia and channel catfish (Ictalurus punctatus) in ponds). These systems and species have benefitted from targeted genetic and nutritional advances, but remain vulnerable to shocks related to market volatility, extreme climate events, and pandemics such as COVID-1910,17,18.

The growth of aquaculture has been fuelled by the expansion in global trade, declines in the availability of wild fish, competitive product pricing, rising incomes, and urbanization—all of which contribute to rising per capita consumption of seafood worldwide11,19. Global fish trade remains limited, however, to a relatively small number of species and countries: salmon, shrimp, catfish, and tilapia collectively represent approximately one-third of internationally traded seafood by value, but only 8% of global seafood production17. The process of globalization itself has been dynamic, with incomes and markets in the global South expanding more rapidly than the global North in recent decades20. The growing importance of domestic markets, particularly in Asia, means that over 89% of aquaculture output does not enter into international markets21.

Freshwater aquaculture

Freshwater aquaculture has been underrepresented in the proliferating literature on global environment and food system interactions since 2000 despite its dominant contribution to aquatic food supplies and nutrition security21,22. Of the 11,625 articles published in English between 2000 and 2020 with marine or freshwater aquaculture (or farming) in their titles (indexed in Web of Knowledge (https://apps.webofknowledge.com/)), three-quarters focused on mariculture and 68% on high-valued mariculture. These metrics do not include the vast literature published in Asia, particularly in China, where freshwater aquaculture has a long and vibrant tradition23.

Freshwater aquaculture consists of a wide diversity of systems across physical and economic scales, infrastructure configurations, species, ownership, and value chains. It consists predominantly of household-managed ponds and small- to medium-scale commercial enterprises that produce a variety of carps and other fish in polyculture systems for local and regional consumption24. Freshwater aquaculture is widely recognized for the production of tilapia and striped catfish (Pangasianodon hypophthalmus) that are produced mainly in earthen ponds for export and national consumption. It also includes the cultivation of freshwater and brackish-water crustaceans, produced intensively in monoculture (for example, whiteleg shrimp (Litopenaeus vannamei)) or in polyculture systems (for example, black tiger shrimp (Penaeus monodon)) with a wide variety of other fish, molluscs, and aquatic plants. Urbanization has increasingly shifted the demand from subsistence to marketed fish25.

A key characteristic of freshwater aquaculture growth during the past 20 years has been the proliferation of value chains in and across countries located in South and Southeast Asia, for example, in Andra Pradesh, India26, Bangladesh24, Myanmar27, Thailand,28 and Vietnam29. China remains the single largest producer of freshwater fish—for export and domestic consumption—accounting for 56% of the global output in 2017 (Extended Data Table 1). The expansion of freshwater aquaculture in Asia (93% of global production) has been driven mainly by urban demand and the decline in wild inland fisheries that previously supported rural livelihoods and food security30.

Diverse value chains underpinning freshwater aquaculture in Asia have emerged with limited governmental support, spurred by economic development, rural transformation, and urbanization. These processes have boosted purchasing power and fuelled the demand for freshwater fish, paving the way for the expansion of private sector investment27,31. The development of aquaculture in small- to medium-scale commercial enterprises in South and Southeast Asia has helped to alleviate rural poverty, through direct benefits to consumers and other value chain participants21,32 and broader ‘spillover’ benefits to labour and livelihoods in adjacent industries33. A similar process of the development of freshwater aquaculture is now occurring in parts of sub-Saharan Africa15, albeit shaped by different social and economic constraints to production, structures of the value chains, and consumer demand16,34,35.

Given the heterogeneity of freshwater aquaculture systems, much of the recent literature focuses on system diversity, nutrition security, and value chains, particularly within the Asian context. Generalizations regarding freshwater production practices, resource depletion, and environmental constraints are limited, but three lessons emerge.

First, over-intensification, particularly in cage aquaculture, has created problems of nutrient pollution and pathogen-related production declines in areas with unconstrained growth, such as Lake Taal, The Philippines36. Cage culture in deep lakes and reservoirs can be subject to turnover and related mortality due to sudden anoxic conditions37. In regions in which freshwater resource depletion, nutrient pollution, disease problems, and other constraints on the use of public waters have emerged, industry consolidation has often followed, forcing poor producers out of the sector29,38,39. In China, aquaculture pollution accounts for more than 20% of the total input of nutrient into freshwater environments in some provinces40, leading to prohibition in many public water bodies that are essential for drinking water and other important ecosystem services41. In other regions, in-pond raceway systems have been promoted to enhance feed-use efficiency and solid-waste removal (for example, channel catfish, carps and tilapia), but widespread adoption has been constrained by high capital costs42.

Second, and related to production intensification, compound feed use in freshwater systems has steadily increased, driven by local and international companies and certification initiatives operating across a range of production systems and countries3,43. An estimated 92% of tilapia, 81% of catfish and 57% of Chinese carps rely on some combination of commercially formulated pelleted feed and feed types made at the farm to supplement the naturally occurring nutrients produced in the culture systems3. Fertilization, combined with supplementary feeds, remains a key approach to producing low-cost tilapia, catfish, and carp in semi-intensive systems, and has underpinned the growth of commercial production in Asia.

Third, the steady emergence and proliferation of relatively low input–output culture-based fisheries through different forms of collective management has permitted access to, and control of, aquatic commons (for example, floodplains, reservoirs, and seasonal water bodies)44. Field studies show that productivity gains from non-fed, often exotic carp have generally been achieved in low-input systems while maintaining or enhancing nutrient balances and the biodiversity of indigenous species45.

These three trends result in a sector tightly integrated into terrestrial food systems via feed, nutrient cycling, and value chains. Scientific knowledge surrounding freshwater aquaculture and local resource use is extensive, especially in an Asian context. In comparison to ocean-based production, however, the global environmental impacts of freshwater aquaculture remain understudied. Specifically, the trend to intensify freshwater systems is increasingly linked to globally sourced feed ingredients that represent a critical area of the overall environmental impact of the aquaculture sector46.

Fish feed and wild fisheries

A major focus of the previous aquaculture review1 was the increasing proportion of annual fishmeal and fish oil production for aquaculture feed, and the consequent potential future impacts on wild forage fish landings and stocks as well as marine ecosystems. In aggregate, global landings of forage fish have trended downward (Extended Data Fig. 2), reflecting full to overexploitation, and harvest restrictions (for example, in Peru) to prevent fishing above maximum sustainable yield levels.

The aquaculture sector has made considerable progress in enhancing the efficiency of use of marine resources over the past 20 years. The global production of fed fish tripled between 2000 and 20173 while the annual catch of forage fish used to make fishmeal and fish oil decreased from 23 Mt to 16 Mt (refs. 47,48) (Extended Data Fig. 3). Global production of fishmeal from capture fisheries and trimmings decreased over the same period from 6.6 to 4.8 Mt (ref. 17). The production of fish oil declined from around 1.5 to 1.0 Mt and has been stable around 1.0 Mt during the past decade49,50,51.

Prices for fishmeal and fish oil have more than doubled during the 2000s and have remained consistently higher than plant-based alternatives since 2012 (Extended Data Fig. 4). Aquaculture producers have responded by reducing the use of fishmeal and fish oil in feed formulations, and these efforts have been reinforced by sustainability goals throughout the supply chain. Fishmeal and fish oil remain important ingredients of fish feed, suppling essential nutrients to support larval and fry performance and survival, but are now used at lower percentages in grow-out, broodstock, and finishing feeds. Nonetheless, the share of global fishmeal used by the aquaculture sector (versus livestock and non-food uses) increased from 33% in 2000 to 69% in 2016, while the share of global fish oil used by aquaculture rose from 55% to 75% (refs. 50,52). A continuation of this trend could push fishmeal and fish oil prices higher, creating further incentives for innovations in aquaculture feed.

Four major developments along the aquaculture supply chain have helped to reduce the dependence on wild fish resources since 2000: rapid growth in omnivorous species production; improved feed conversion ratios (FCRs) for all fed species; higher use of alternative protein and oil ingredients in feed; and increased production and use of fishmeal and fish oil from fish-processing wastes and bycatch. In addition, improvements in processing technologies have increased fishmeal recovery from anchovies and other pelagic species from 22.5% to 24% over the past few decades53. Fish oil recovery remains around 5% for anchovies and about 10% for fatty fish such as herring, capelin, and sand eel, which are used widely in the production of fish oil in Europe.

Between 1997 and 2017, the volume and share of freshwater fish produced with compound feeds, such as fed carps, tilapia, and catfish, increased substantially, but FCR also improved (Extended Data Table 2). Meanwhile, fishmeal inclusion rates dropped for these species to 1–2%, and there is almost no fish oil used in most types of freshwater aquafeed. Compound feed types for marine and brackish water finfish and crustaceans remain higher in fishmeal and fish oil, but their fishmeal and fish oil inclusion rates decreased by one-half to two-thirds over the period. For shrimp, there has been a major global shift in production away from black tiger shrimp to the more omnivorous whiteleg shrimp. Breeding strategies for salmon and trout and improvements in feed ingredient quality and formulations have permitted much higher inclusion of plant protein concentrates in feed54.

The increasing use of trimmings in fishmeal production, particularly for lower-valued freshwater species, has also had a critical role in lowering the use of wild fish in feed since 2000 (Table 1). The estimated use of trimmings is three times the use of wild fish in fishmeal for tilapia and catfish. Even high-valued marine and brackish species, such as salmon and shrimp, use equal ratios of fishmeal from trimmings and wild fish in their feed. Trimmings from both wild fisheries (for example, tuna in Thailand) and aquaculture (for example, salmon in Norway, pangasius in Vietnam) now comprise roughly one-third of global fishmeal production and one-half of fishmeal production in Europe3,8,47. Greater use of trimmings in fishmeal has been documented, in particular, in feed formulations for salmon production in Norway55 and for shrimp and catfish production in Thailand44.

Table 1 Wild fish used in aquaculture feeds for 11 commonly farmed fed fish and shellfish

The combination of improved FCR, reduced fishmeal and fish oil inclusion ratios, and increased use of fishmeal from trimmings have lowered the ratio of wild fish inputs to farmed fish output (fish-in:fish-out ratio (FIFO)) (Extended Data Tables 23). On a global basis, FIFO was 0.28 in 2017 for the main aquaculture species groups that are dependent on feed (Table 1). FIFO exceeded 1.0 for shrimp, salmon, trout, and eels, but was still far below the FIFO calculated for these species 20 years ago. The previously published review of aquaculture and world fish supplies1 calculated a global FIFO for fed aquaculture species of 1.9 using 1997 data (FIFO by species group was 2.81 for shrimp, 5.16 for marine fish, 3.16 for salmon, 2.46 for trout, 4.69 for eels, and below 1.0 for all freshwater fish). Calculations in Table 1 include the residual availability of fishmeal and fish oil from feed across different species groups, which can be used for global aquaculture feed production—thus addressing a point of contention related to earlier FIFO calculations8,47,56.

Despite the positive contribution of trimmings to global fishmeal production, aquaculture production in Asia—notably China, Thailand, and Vietnam—still relies on low-value feed-grade fish from non-targeted fisheries (including quasi-targeted bycatch) as an input for feeds57. In 2017, Asian aquaculture systems consumed more than 6.6 Mt of low-valued fish as direct or indirect feed inputs17. Roughly one-third of the Chinese domestic fish catch comprises low-valued fish (89% juveniles) that are used mainly in aquaculture feeds57. Such feed-grade focused fisheries can affect wild fish populations and marine ecosystems considerably through the capture of juvenile fish and loss of biodiversity12,57.

Feed from land and sea

Although marine resources continue to have an important role in aquafeed, the use of plant-based ingredients has been increasing steadily, creating tighter connections between land and sea. The aquafeed industry has become increasingly dependent on conventional animal feed ingredients from terrestrial systems that are widely traded in international markets (Fig. 2).

Fig. 2: Interactions between sea and land.
figure 2

Blue arrows show the flows of aquatic products from freshwater and marine systems, including wild fish used as fishmeal and fish oil in animal feeds. Green arrows show the flows of terrestrial feed products. Co-products from terrestrial and aquatic processing used in feeds are indicated by dotted arrows. Live-weight and edible production from aquaculture sources are indicated in black and red numbers, respectively. Fishmeal (FM) and fish oil (FO) shares used in aquaculture and livestock production are also shown. Aquafeeds include a majority of ingredients from agriculture, and co-products from processing of terrestrial and aquatic foods are used as ingredients for fish feeds. Data sources: edible conversions9 and production data2,49,50,51,204,205. GHG, greenhouse gas.

Three factors have contributed to the expanding role of terrestrial food systems in global aquaculture: feed ingredients tailored to fish; feed formulations based on accurate nutritional requirements; and breeding to enhance fish growth, feed efficiency, and animal health. Feed ingredients from grains and oilseeds are the basis of livestock feeding, but carnivorous fish have difficulty digesting starch, non-soluble carbohydrates, or fibre in these ingredients. They are also more sensitive than livestock to antinutrients and toxins in plant protein ingredients58. Additional processing steps have been introduced to increase the nutritional value of plant and land animal protein concentrates for fish59,60,61. Alternative oil sources—including rapeseed (canola) oil, palm oil, and poultry fat—are now commonly used substitutes for a portion of fish oil62. Although farmed salmon remain a good source of omega-3 fatty acids, replacing fish oil with terrestrial oils lowers the omega-3 content in fillets63. The use of high omega-3 oils from algae or genetically modified oilseeds can reduce fish oil use in salmon feed while maintaining the health benefits to consumers, but this remains economically inefficient and, in some markets, the latter is constrained by weak consumer acceptance59,64.

Replacing fishmeal and fish oil in feed with plant-sourced products affects the health of piscivorous aquaculture species through alterations of the microbiome, changes in gut morphology, modification of immune function, and interference with normal function of the endocrine system and maturation65,66. Moving towards full plant-based diets for these species thus increases disease risks. New tools, including high-throughput technologies (metabolomics and proteomics), RNA sequencing, polymerase chain reaction (PCR) and whole-genome sequencing, have been used since 2000 to detect and mitigate these problems67. Conventional breeding and marker-assisted selection have also been used to improve fish growth and health, and lessons from terrestrial animal breeding, especially poultry, have been used to advance breeding strategies for fish68,69. For example, genetically selected trout, which show improved weight gain of 10–15% per generation on fully plant-protein feeds70, are able to digest amino acids from plant proteins in a similar temporal pattern as fishmeal and do not develop distal enteritis in the intestine when fed high-soy diets71.These tools have thus far been applied to only a few high-valued aquaculture species.

The increasing share of plant-based ingredients in mariculture feed types, coupled with the steady growth in feed use in freshwater aquaculture, has led to a new set of controversies surrounding resource use and the environmental effects of terrestrial crop production for aquafeed. Life cycle analyses indicate that feed accounts for more than 90% of the environmental impact from fed aquaculture production72,73. Studies modelling fishmeal replacement with plant-based proteins (for example, soy protein concentrate) in shrimp74 and salmon75 show potential increases in ecotoxicity from fertilizer and pesticide use, rising pressure on freshwater and land resources, and heightened carbon emissions and biodiversity loss from forest clearing—particularly in Brazil.

Aquaculture producers seeking to market sustainable products are therefore faced with the unintended environmental and social consequences of their feeding practices. For example, between 2000 and 2016, the Norwegian salmon aquaculture industry cut its shares of marine protein in feed from 33.5% to 14.5% and marine oils from 31.1% to 10.4%, and increased the shares of plant proteins from 22.2% to 40.3% and terrestrial oils from 0 to 20.2%76. Despite its success in substituting fishmeal and fish oil with plant-based alternatives, including non-genetically engineered soy, the industry has been under pressure to identify new feed sources to eliminate the environmental damages associated with forest conversion to crop production in Brazil77, and parts of the industry have already banned the use of Brazilian soy in aquafeed.

Although certain segments of the aquaculture industry, such as salmon, face sustainability challenges with terrestrial feed sourcing, the share of global animal feed used as aquafeed is small—estimated at 4% (compared with roughly 40% for poultry, 30% for swine, and 25% for ruminants)43. Many terrestrial feed ingredients for aquaculture are by-products, such as oilseed protein concentrates extracted from the processing of food products, or protein meals and oils recovered from the processing of livestock and seafood (including aquaculture)43,59. Recycling processed by-products and food wastes into high protein feed ingredients contributes to the sustainable production of food globally, but life-cycle analysis is needed to measure the net environmental impact.

Nonetheless, terrestrial crop demand for aquafeed is expected to rise in the future as the production of finfishes and crustaceans expands in freshwater and marine systems43,74. Rising demand will probably place pressure on natural resources and feed prices. Research on new feed ingredients has proliferated recently59,74,78,79,80,81 and will continue to expand. Single-cell proteins, insect meal, and microalgae represent early stage technologies with potential for replacing fishmeal and fish oil in aquaculture feed81.

Extractive species

Extractive species—molluscs and algae—have doubled in volume since 2000 (Fig. 1b) and represent the third area of aquaculture development. Extractive filter-feeding bivalves and algae accounted for 43% of total (live-weight) aquacultural output in 20172. On an edible-weight basis, however, molluscs and algae comprised only 6% and 7.6%, respectively, of total aquaculture output9. These groups also provide a wide range of ecosystem services and non-food products8,82,83,84,85.

Molluscs

Molluscan aquaculture includes approximately 65 reported species, mainly bivalves (clams, oysters, scallops, and mussels)3. Clams, for example, Japanese littleneck (carpet shell, Venerupis philippinarum), and Pacific cupped oysters (Crassostrea gigas), account for two-thirds of the total. Bivalves do not require feed inputs, making them attractive candidates for the expansion of sustainable seafood—a point that was made in the previous review1 and has been argued for more than 30 years82,84,86,87,88. Some high-value farmed molluscs, such as abalone and conchs, are herbivorous and reliant on feed, but they account for only 2.4% of cultivated molluscan output3.

The global production of farmed molluscs grew at an annual rate of 3.5% between 2000 and 2017, which is lower than that of farmed fish (5.7%) and crustaceans (9.9%)3. In China, however, bivalve culture expanded considerably in response to consumer demand. Between 2005 and 2014, the volume of scallops increased by 80.4%, clams by 40.8%, oysters by 30%, and mussels by 19%84. China is the largest consumer and producer of molluscs, accounting for 84% of global cultivated volume in 2017.

In addition to seafood, outputs from molluscan aquaculture are used in a variety of industrial products, such as fertilizers, construction materials, poultry grit, pharmaceuticals, and nutraceuticals82,84. Bivalves also provide important benthic and coastal ecosystem functions. By filtering phytoplankton and accumulating nitrogen and phosphorous, they remove nutrients from the ambient environment when harvested. In addition, molluscan aquaculture can provide habitat structure, shoreline stabilization, and local incomes for waterfront communities82,84,87,89. The role of bivalves as a carbon sink or source remains unclear, however, and research aimed at measuring carbon sequestration and system performance from these systems is ongoing84,90,91.

The most widely recognized ecosystem service of molluscan aquaculture is the assimilation of excess nutrients from human activities, for example, agriculture, aquaculture, and sewage discharge. Bivalves filter large volumes of water daily, and their abilities and impacts are species- and area-specific82,84,92. Nutrient extraction has two modes: harvest and removal of the bivalves, and increased denitrification near dense populations of wild or farmed bivalves. The ability of bivalves to mitigate coastal eutrophication fully requires large-scale production and a considerable reduction in nutrients at the source is also needed in most cases93. Efforts have been made to introduce new markets for bivalves that generate offset credits for non-point source pollution, but these markets have yet to develop at scale84,94,95

Although bivalves can enhance water purification and water clarity, they also absorb viruses, bacteria, toxic algae, and polluted organic particles from the ambient environment. Food safety risks are therefore high for molluscs cultivated in polluted environments. Moreover, the introduction of large densities of filter-feeding bivalves to a habitat, whether in suspended or bottom culture, has the potential to impart negative changes in the water quality and benthic ecosystems (for example, depletion of phytoplankton and seston, and localized increases in sedimentation rates through bio-deposition) and can present serious disease risks96,97. Most negative impacts of bivalve production are site- and species-specific, and uncommon98. Negative environmental impacts may ensue if aquaculture systems are overstocked, inappropriately sited, or unsustainably managed, as indicated in certain cases in China99,100. Assessment of the influence of bivalve farming on the surrounding environment can be a complex process. As in many aquaculture systems, however, the application of carrying capacity models101,102,103,104 and routinely modified best management practices105 have continuously improved the sustainability of molluscan culture.

Algae

Since 2000, there has been a growing appreciation for algae (dominated by macroalgae or seaweed) for improved nutrition, industrial use, and ecosystem services, even in regions outside China, Japan, Korea, and parts of South America, where seaweeds have been consumed as food for centuries83,106,107. The global production of aquatic plants and algae has tripled from 10 Mt of wet biomass in 2000 to more than 32 Mt in 2017, with aquaculture contributing more than 97% of the current volume17,106. Of the 32 Mt of cultured algae—99% of which is produced in Asia—between 31% and 38% is consumed directly as food (Extended Data Table 4). The majority is used by the food industry sector as polysaccharide additives and functional food ingredients, and by the non-food sector as hydrocolloid products in nutraceuticals, pharmaceuticals and cosmetics, and to a lesser extent as fertilizers, feed ingredients, biofuels, bioplastics, and other industrial outputs106,108,109.

Research in recent decades has explored the potential for seaweeds to substitute for terrestrial crop and animal production in protein, fat (omega 3) and energy intake—alleviating pressure on freshwater and land resources and biodiversity—but there is little evidence to date that seaweeds can contribute substantially to human macronutrient intake110. Numerous studies have highlighted the micronutritional and sensory attributes of seaweeds for direct human consumption111 or as functional foods112, but benefits are difficult to quantify because of variation across species, seasons, and coastal environments, and a lack of clear scientific evidence regarding nutritional bioavailability and metabolic processes associated with algal consumption110. Research has examined the use of microalgal biomass in aquaculture feed as a cost-competitive replacement for fishmeal and the use of macroalgae in dairy and cattle feed to reduce methane emissions113, but these types of feed have yet to develop commercially at scale.

Like molluscan aquaculture, seaweed culture is widely recognized for its ecosystem service values beyond the provision of food and feed, yet producers have not been able to capture this value in financial returns114. Bioremediation is the main ecological service reviewed in the literature. Some seaweed systems receive additional fertilizers, for example, in low-nutrient coastal zones, although fertilization is regulated in Japan and South Korea115. Ongoing research is also investigating the role of seaweed culture in mitigating ocean acidification, sequestering carbon, and enhancing biodiversity116,117,118. In China, studies suggest that large-scale seaweed aquaculture is effective in reducing nitrogen levels, controlling phytoplankton blooms, and limiting the frequency of toxic algal blooms119,120. Considerable variability exists, however, in the potential provision of seaweed ecosystem services across cultured systems, seasons, and scales.

Seaweed aquaculture lags behind other food sectors in breeding, pathogen management, and optimization of production systems for nutrient, light and temperature conditions83. Bacterial and viral outbreaks are especially high in intensively farmed seaweed systems, where disease management can account for up to 50% of farm-variable costs106,121. New seaweed cultivars with higher yield potential, disease resistance, nutritional qualities, and consumer attributes are needed to ensure production growth and increased value for the industry108,122.

Overall, progress in research and development for the seaweed industry has not met expectations in recent decades108. A few major exceptions include China’s success in cultivating alginate-bearing seaweeds (Saccharina japonica, also known as Laminaria japonica) and the expansion of agar-bearing seaweed aquaculture (Gracilaria) at scale. The industry remains fragmented outside Asia (mainly China and Indonesia), and competitive pricing constrains net revenues and incentives for innovation108. Value in the seaweed industry could be enhanced through the adoption of a ‘biorefinery’ approach to processing, in which the most valuable products from the algal biomass are extracted sequentially, leaving the remaining material for commodity uses and minimizing waste, energy inputs and environmental harm123. This approach has been successful in various segments of terrestrial agriculture. New global initiatives to promote seaweed production and use124 will need to tackle critical social, economic, and regulatory constraints, including unethical supply chain activities125, food safety considerations, and limited consumer demand83,106,126.

Persistent challenges

Over the past 20 years, trends in the production and environmental performance of aquaculture have been positive. Destructive habitat conversion, particularly by shrimp farming in mangrove ecosystems raised in the previous review1, has declined markedly since 2000127,128. Challenges to the industry persist, however, including the effects of pathogens, parasites, and pests (PPP), pollution, harmful algal blooms, and climate change. The aquaculture industry has become increasingly vulnerable to these stressors given its rapid expansion, its reliance on the ambient environment, and the changing world in which all food systems operate43,129.

Pathogens, parasites and pests

Pathogens, parasites, and pests (PPP) are a chronic risk for the aquaculture sector, and the intensification of production and increased trade and supply chain integration since 2000 have amplified these risks130. Aquaculture species differ in their defences, and although invertebrates lack the adaptive immunity of finfish, their innate immune system—which is certainly not simple or homogenous—is not fully understood131,132,133. The gut is an important component of the immune system for finfish, which allows diet and alterations in the microbiome to influence the susceptibility and potential resistance of finfish to disease, whereas the external microbial communities are vitally important for the health status of invertebrates134. For most high-value and widely traded species, there have been substantial advances in PPP identification, diagnosis, and treatment over the past 20 years, derived in part from innovations in agriculture and human medicine131,132,134,135. Such science-led disease management options remain largely unavailable for many low-value aquaculture species and low-income regions owing to a lack of product development and prohibitive costs. Global networks, such as the World Organization for Animal Health, have emerged to facilitate the transfer of scientific knowledge.

The aquaculture industry has responded to PPP pressures in recent decades using a variety of approaches. Adoption of best management practices (for example, for site and system selection, stocking densities, species rotations, broodstock, and feed quality, filtration, pond, and cage cleanliness, parasite monitoring and removal, culling, zoning, and surveillance) has been the most important means of minimizing PPP risks across all types of production systems25,134. Once a pathogen, parasite, or pest is widely recognized in a given system, avoidance through biosecurity is the primary management action available to most aquaculture producers136. In some systems in which epizootics have caused boom-and-bust cycles, resistant species have been introduced, provided that viable markets exist137. For example, the aquaculture industry in Thailand transitioned from black tiger shrimp to whiteleg shrimp, largely because of problems with infectious diseases, specifically white spot disease and monodon slow growth syndrome138,139.

The use of therapeutants—chemical substances used to prevent and treat pathogens—including antimicrobials, has become a common practice in many aquaculture systems140. There are no comprehensive data on the nature and extent of therapeutic use in most aquaculture sectors, and both good and bad practices are found worldwide141,142,143,144. Although improper therapeutant use can pose risks to the health of consumers, workers, cultured organisms, and surrounding ecosystems (particularly in open production systems)96,142, the misuse of antimicrobials in aquaculture is especially problematic as it can lead to the emergence and transfer of antimicrobial-resistant genes and bacteria140.

As an alternative, large investments have been made in selective breeding for disease resistance in certain aquaculture species, but this avenue is costly and cannot easily be replicated across species145. Effective multivalent vaccines have also been introduced for some high-value species such as salmon and trout146, and show promise for replication in marine species aquaculture if efficient and cost-effective delivery systems (for example, oral or immersion) can be developed147. Vaccines developed for farmed salmon have led to reductions in antibiotic use of up to 95% in Norway, the UK, Ireland and Canada, but antibiotic use remains high in Chile143. Advanced water management through recirculating aquaculture systems, as discussed in the following section, represents another important, but relatively costly, technology for controlling PPP148. In addition, supplementation of feed with nutraceuticals, plant extracts, prebiotics, and probiotics is used to boost fish growth and immunity and serves as a promising alternative to antibiotics—mainly in high-value production systems, but also increasingly in lower-value freshwater systems in Southeast Asia142.

Even in sectors in which major investments and progress have been made in the detection, avoidance, and treatment of PPP, new threats frequently emerge. For example, the salmon aquaculture industry has successfully controlled some diseases, such as infectious pancreatic necrosis virus and infectious salmon anaemia, but other diseases and parasites (for example, salmon rickettsial syndrome and sea lice) remain costly for many producers and damaging to wild salmon as treatment options are either unavailable or the target organism has become resistant to treatment131,143,149,150. Similarly, despite the shift from black tiger shrimp to whiteleg shrimp, emerging diseases such as white spot disease, acute hepatopancreatic necrosis disease, shrimp hemocyte iridescent virus, and the microsporidian parasite (Enterocytozoon hepatopenaei) have resulted in substantial production losses and sustained economic costs to the shrimp industry136,151,152,153.

As aquaculture production expands into new geographies, PPP outbreaks and the risks to human health from therapeutic management approaches will probably increase, particularly in low-income regions. Studies also project increased risks of aquaculture disease incidence and antimicrobial resistance associated with disease management owing to global warming154,155,160. The quantification of trends in PPP is, however, complicated by variation between national and international disease monitoring and treatment regulations and by a lack data for most aquaculture species and production regions157. In the absence of reliable data, the incidence and management of PPP throughout the global aquaculture industry is and will remain highly unpredictable.

Harmful algal blooms and climate change

Harmful algal blooms are increasing globally with respect to frequency, magnitude, duration, geographical ranges, and species composition, and are driven largely by anthropogenic processes98. They occur in aquaculture areas worldwide, and their influences on production vary widely depending on species-specific effects98,158. Intensive and poorly managed finfish and crustacean systems can contribute to the emergence of harmful algal blooms, and shellfish, sea urchins, and sea cucumbers are common vectors for toxic microalgae98. Toxic blooms represent a large economic cost to parts of the industry for which monitoring and management are ineffective. Large blooms of Pseudochattonella and Karenia in southern Chile in 2016 caused salmon mortalities of 40,000 tonnes and required several salmon, mussel, and abalone operations to close for 2 years because of food safety risks, generating economic losses of around US$ 800 million98,159.

Climate-driven losses to aquaculture productivity and livelihoods stem mainly from suboptimal growing temperatures, sea-level rise (saltwater intrusion), infrastructure damage, droughts and freshwater shortages, and rising feed costs associated with lower crop yields and forage fish landings156,160. Risks to aquaculture infrastructure often drive investments to more protected geographies and systems. In addition, ocean acidification affects shellfish production, mainly at the larval life stage, and is managed through adjustments in pH within the hatchery161. The literature does not support generalizations of the damages of ocean acidification to shellfish aquaculture given the species-specific responses documented, sparse data, uneven and questionable experimentation, and the complexity of pathways through which species are affected162. Climate change also amplifies the uncertainties surrounding PPP and harmful algal blooms in aquaculture159,160,163 and predictions remain uncertain98,164. In general, scientific studies on climate–aquaculture interactions are based on laboratory-based tolerance data and modelled, but not validated, for commercial aquaculture and thus remain speculative165,166,167,168. There are no comprehensive data on climate-driven production and economic losses in aquaculture at regional or global scales, and outcomes are contingent on adaptation responses129.

Responding to the challenges

Increased attention has been directed to ecosystem-based management, system design, and new forms of private and public sector governance to manage biological and climate risks, and encourage sustainable aquaculture production86,169,170. Integrated multi-trophic aquaculture has shown high bioremediation capacity in China120,171, but has demonstrated limited commercial success globally despite considerable research interest172,173. Recirculating aquaculture systems and offshore aquaculture have promising growth potential.

Recirculating aquaculture systems

Recirculating aquaculture systems are designed to control all environmental facets of production by continually filtering, treating, and reusing water, and thereby increasing operational efficiency and reducing risks from PPP and climate change. Recirculating aquaculture systems have lower direct land and water requirements than conventional aquaculture and enable higher stocking densities174 but are constrained by large energy requirements, high production costs, waste disposal challenges, and risk of catastrophic disease failures78,175,176.

Recirculating aquaculture system technologies are typically used when advantages in fish performance outweigh the increased costs—for example, for broodstock and vulnerable early life stages175,177 and recently for full-life cycle production of salmon. Applications of recirculating aquaculture systems within raceways and channelled pond systems for shrimp aquaculture are also cost-effective in many farming areas given high disease and water-quality risks148. Grow-out operations using recirculating aquaculture system technology are progressively focused on species with high market value, established production protocols, and production models that are large enough to realize the efficiency benefits of scale177,178. The competitiveness of recirculating aquaculture systems for full grow-out relative to other production systems remains uncertain, however, and there have been several failures in North America and Europe and few large-scale, commercial successes over multiple years179.

Offshore aquaculture

Offshore aquaculture in deep and open ocean waters is designed to produce large volumes of fish while minimizing land and freshwater constraints and coastal environmental impacts, such as nutrient pollution and sea lice infestations78,180. Prudent siting is required, however, to avoid conflicts with other marine uses and to ensure the effective dilution of wastes, particularly for large-scale systems181. Norway and China lead in offshore fish aquaculture with the introduction of massive submersible cages182,183,184. Given large capital costs and high risk-to-return ratios, offshore aquaculture in other countries has been confined mainly to small-scale pilot operations cultivating high-valued, carnivorous species. Offshore environments present a range of operational challenges (for example, water depth, strong currents and waves, and storms), which have induced several new design approaches180. Government regulations have constrained commercial development of offshore aquaculture, particularly in the USA and European Union, because of public controversy regarding its interactions with the marine environment, potential ecological damage, and competing uses of ocean and natural resources185,186.

Governance

Aspirations to improve the environmental and social performance of aquaculture practices and technologies have led to the emergence of new combinations of public and private regulation, codes and standards187; however, the application of these governance instruments has struggled to match the expanded geographies, volumes, and diversity of aquaculture systems188. The uneven implementation of government regulation has led to regional disparities in production, growth and system design. Governments have facilitated aquaculture expansion in many Asian countries, Norway, and Chile, whereas in other regions—including the European Union and USA—governments have constrained growth15. In very few countries, such as Norway, has strict environmental regulation allowed the sector to expand by coordinating governing institutions to support planned aquaculture growth15. Uneven regulation has led to disparities in investment and trade, with only a few export nations selling into major net seafood importing markets such as the USA and European Union.

In response to public over- and under-regulation, several types of private governance arrangements have emerged with the intention of shaping demand for sustainable, ‘fair’, and organic aquaculture production. For example, 30–50 voluntary labelling, certification and rating schemes have been introduced by non-government organizations and private companies189,190.

Farm-level certification is setting new norms for sustainable aquaculture globally191, yet the role of certification remains limited by low (yet growing) levels of producer compliance. The two largest certification groups—the Aquaculture Stewardship Council (ASC) and the Global Aquaculture Alliance Best Aquaculture Practice (GAA-BAP) standards—account for 3% of global aquaculture production (Extended Data Fig. 5). Low levels of compliance have been attributed to insufficient finances, low demand for certified products, poor literacy levels, and inadequate administrative skills required for monitoring and reporting192,193, and environmental production risks beyond the control of the producer194. Consumer guides such as the US Seafood Watch have rated a further 53% of global production (Extended Data Fig. 5). These ratings are involuntary and based on broad-scale assessments at the sector or regional level.

Certified and rated production is skewed to major export species. Overall, 57% of salmon and trout, 17% of shrimp and prawns, 17% of pangasius and 11% of tilapia are certified (Extended Data Fig. 6), with higher levels of compliance observed in countries with a greater proportion of vertically integrated supply chains38,195,196. Domestic demand for sustainable products in Asian seafood markets appears to be increasing, driven by food safety concerns197, but considerable growth in domestic demand for sustainable seafood is needed to make aquaculture certification and rating systems effective globally187.

States can enhance the success of private governance arrangements by providing capabilities, resources, and minimum regulation to support improvements in farm practices. Both certification and consumer guides have now started shifting to ‘hybrid’ forms of governance190, which integrate private assessment tools into spatial management units that are managed in collaboration with buyers and states198. These ‘beyond farm’ forms of management aim to foster greater inclusion of large and small-holder producers in a given jurisdiction to minimize PPP, climate, and other ecological risks169. They are also increasingly aimed at avoiding spatial conflicts, promoting the trade in bio-derivatives, and creating new ecosystem and climate services markets199,200,201,202. They may also enable greater transparency and trust of aquaculture products exported from developing countries and create inclusive improvement pathways for the 90% of aquaculture output that is not directed towards export markets.

Outlook

Over the past 20 years the aquaculture sector has evolved from having a relatively minor role to playing a mainstream part in the global food system. The aquaculture literature reflects the increased attention to food system outcomes, with consumers, value chains, and sustainability criteria progressively shaping the direction of the industry. Continued growth in the sector has important implications for achieving the United Nations Sustainable Development Goals.

Three key patterns emerge in this Review. First, freshwater fish have a central role in the global production, contributing more than any other aquaculture sub-sector to the total (live and edible) volume, rural livelihoods, and food security during the past two decades. Because most farmed freshwater fish do not enter the global market, however, there is currently little impetus for producers to engage in sustainable practices with recognized ratings or certification. Second, marked improvements have been made in the efficiency of marine resource use across all fed species and in the field of fish nutrition. Further gains in these areas may be more difficult and costly to achieve for carnivorous species, but the increasing costs of fishmeal and fish oil that are associated with marine resource limitation will provide continued incentives for innovation. Third, careful siting of aquaculture systems underpins the commercial and environmental success of the industry. Almost all freshwater and marine aquaculture systems interact with the ambient aquatic environment and both benefit from and provide environmental services to the ambient environment as a result. Prudent siting and scaling are essential for maximizing the ecosystem services provided by farmed extractive species and for mitigating critical challenges to the industry associated with PPP, coastal pollution, and climate change.

The wide diversity of aquaculture systems across species, geographies, producers, and consumers prevents the development of a single strategy to achieve sustainable and healthy products. Governance systems need to be designed with clearly articulated, science-informed goals, but without overly proscriptive standards and regulations for realizing those goals. Such flexibility is needed to support the abilities of industries, governments, and non-government organizations to innovate while still providing clear end points and requirements for monitoring, reporting, transparency, and accountability. The aquaculture sector will continue to face large uncertainties in the future, including climate change, evolving PPP pressures, pandemics, and market disruptions and changes in food systems more broadly.

Looking ahead, the effective spatial planning and regulation of aquaculture sites will be paramount for achieving positive environmental outcomes, especially as aquaculture systems increase in scale and production intensifies. The industry is investigating recirculating and offshore technologies to reduce its exposure to and impact on aquatic environments; however, these systems will require innovative financial and environmental management to have any chance of widespread success. In addition, investments are needed in an array of PPP prevention strategies across different aquaculture sub-sectors, recognizing that treatments after PPP problems emerge are largely futile. Finally, future policies and programmes to promote aquaculture will require a food systems approach that examines nutrition, equity, justice, and environmental outcomes and trade-offs across land and sea. Tools such as life cycle analysis will need to be refined and deployed to ensure comparability between terrestrial livestock and aquaculture production on the basis of nutritional value and global environmental outcomes. Research along these lines, as advanced through new studies including the ongoing Blue Food Assessment203, will undoubtedly be documented in the next 20-year retrospective review. Aquaculture systems can be designed and implemented to be highly sustainable. The human dimension presents both the opportunity and the challenge.